Table of Contents
What is Autoimmunity?
Autoimmune diseases occur when the adaptive immune system launches specific responses against self-antigens. These responses mimic normal immunity but are misdirected, leading to tissue destruction, inflammation, and chronic disease.
Autoimmune Responses:
- Involve both autoreactive effector T-cells and autoantibodies
- Can be organ-specific (e.g., Type 1 Diabetes, Myasthenia Gravis) or systemic (e.g., SLE, Rheumatoid Arthritis)
- Often involve Type II, III, or IV hypersensitivity reactions
- Are more common in females (~2/3 of cases)
How Do Autoreactive T and B Cells Arise?
During lymphocyte development:
- Random gene rearrangement sometimes generates self-reactive lymphocytes
- Normally, these are deleted or inactivated (a process called self-tolerance)
- Autoimmunity = failure of self-tolerance mechanisms
Mechanisms of Immune Tolerance
1. Central (Thymic) Tolerance
- Strongly self-reactive lymphocytes are deleted in the thymus (T-cells) or bone marrow (B-cells)
- Involves expression of self-antigens by dendritic-like cells
- Some autoreactive lymphocytes escape into the periphery
2. Peripheral Tolerance
- Anergy: Without co-stimulation (signal 2), self-reactive lymphocytes become inactive
- Regulatory T-Cells (Tregs): Suppress immune responses via inhibitory cytokines
- Ignorance: Weakly autoreactive cells may never encounter sufficient antigen or stimulus
- Physical Separation: Some antigens are hidden in immune-privileged sites (e.g., brain, eye)
What Triggers Autoimmunity?
A. Genetic Predisposition
- Many autoimmune diseases run in families
- Associated with certain HLA alleles (especially MHC-II)
- More frequent in females due to hormonal & genetic factors
B. Environmental Factors
- Identical twins only show ~25% concordance in some diseases (e.g. SLE)
- Suggests strong environmental component
Pathogenic Mechanisms of Autoimmunity
1. Exposure of Hidden Epitopes
- Trauma or disease exposes normally hidden antigens
- Autoantibodies form → Chronic inflammation → More antigen release → Disease perpetuation


2. Epitope Spreading
- Autoreactive B-cells present multiple antigenic fragments
- Activates multiple autoreactive T-cells
- Results in widened autoimmune response
- Example: SLE → Anti-DNA and Anti-Histone antibodies
Infectious Triggers of Autoimmunity
A. Promotion of Lymphocyte Activation
- Infection causes inflammation & high levels of co-stimulation
- May activate ignorant autoreactive lymphocytes
- APCs may present self-antigens → Activation of autoreactive T-cells
B. Molecular Mimicry (Cross-Reactivity)
- Pathogen antigens resemble host proteins
- B-cell and T-cell responses cross-react with self
- Examples:
- Rheumatic Fever: Strep M-protein mimics cardiac tissue
- MS: Anti-EBV antibodies cross-react with myelin
M-Protein & Rheumatic Heart Disease
Group A Streptococcus (GAS) can cause:
- Pharyngitis, cellulitis, necrotising fasciitis, and toxic shock
- Some strains are rheumatogenic → cause autoimmune disease
Mechanism:
- GAS M-Protein structurally mimics cardiac myosin
- Induces cross-reactive antibodies → Damage to:
- Heart valves
- Chordae tendineae
- Myocardial tissue
Organ-Specific Autoimmune Diseases


Summary – Autoimmunity
Autoimmunity arises from a breakdown in immune tolerance, allowing the adaptive immune system to target self-antigens. It can manifest in organ-specific or systemic forms, and is often influenced by both genetic and environmental factors. Key mechanisms include central and peripheral tolerance failure, epitope spreading, molecular mimicry, and pathogen-induced immune activation. For a broader context, see our Immune & Rheumatology Overview page.